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Thomas R Berkelman

from Oakland, CA
Age ~63

Thomas Berkelman Phones & Addresses

  • 1227 Ashmount Ave, Oakland, CA 94610 (510) 562-1120
  • Piedmont, CA
  • Monte Rio, CA
  • 558 Superior Ave, San Leandro, CA 94577 (510) 562-1120
  • Sacramento, CA
  • San Francisco, CA
  • 1227 Ashmount Ave, Oakland, CA 94610 (510) 326-8593

Work

Position: Protective Service Occupations

Education

Degree: Bachelor's degree or higher

Publications

Us Patents

Coumarin-Based Cyanine Dyes For Non-Specific Protein Binding

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US Patent:
7863048, Jan 4, 2011
Filed:
Oct 19, 2009
Appl. No.:
12/581632
Inventors:
Thomas R. Berkelman - Oakland CA, US
Assignee:
Bio-Rad Laboratories, Inc. - Hercules CA
International Classification:
G01N 33/00
C07D 405/02
US Classification:
436 86, 546 66, 546 89, 546 99
Abstract:
Protein dyes whose molecular structure is that of a coumarin moiety coupled to a quaternary ammonium heterocycle through a vinyl or polyvinyl linkage demonstrate the ability to associate with proteins in a non-covalent, non-specific manner at low pH, where the associated form displays a significantly higher fluorescence emission than the unassociated form. This makes the dyes useful as selective labels for proteins at the low pH and eliminates the need for the removal of extraneous components from the medium in which the proteins reside prior to detection.

Hydrolysis-Resistant Polyacrylamide Gels

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US Patent:
8282800, Oct 9, 2012
Filed:
Sep 1, 2009
Appl. No.:
12/552104
Inventors:
Craig Rowell - Albany CA, US
Cory Panattoni - Winters CA, US
Thomas R. Berkelman - Oakland CA, US
Sean Cater - Oakland CA, US
Shane Petersen - Fairfield CA, US
Lee Olech - Pinole CA, US
Xuemei Yang - Walnut Creek CA, US
Assignee:
Bio-Rad Laboratories, Inc. - Hercules CA
International Classification:
G01N 27/447
US Classification:
204468, 204456, 204606
Abstract:
Polyacrylamide gels that offer high resolution in protein separations and are more stable relative to hydrolysis than conventional polyacrylamide gels that rely on Tris or Tris-Bis as buffering agents are made by incorporating triethanolamine in place of most or all of the Tris or Tris-Bis.

Conjugates Of 1,4,7-Triazacyclononanes, Dinuclear Metal Complexes Of Such Conjugates, And Methods Of Use For Both 1,4,7-Triazacyclononanes And Conjugates

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US Patent:
8536162, Sep 17, 2013
Filed:
Mar 9, 2011
Appl. No.:
13/044220
Inventors:
Thomas R. Berkelman - Oakland CA, US
Lisandra Martin - Victoria, AU
Rhiannon Jones - Richmond, AU
John Walker, II - San Leandro CA, US
Assignee:
Bio-Rad Laboratories, Inc. - Hercules CA
International Classification:
A61K 31/33
C07D 255/02
US Classification:
514183, 540474
Abstract:
Conjugates of 1,3-bis(1,4,7-triazacyclonon-1-yl)-2-hydroxypropanes with a variety of conjugating members are used in the formation of dinuclear metal complexes which bind to phosphate esters. By virtue of their conjugated forms, the complexes are incorporated into chromatographic media, affinity binding reagents, and dyes, which make the complexes useful in a wide range of assays, separations, and purifications. In addition, dinuclear metal complexes of 1,3-bis(1,4,7-triazacyclonon-1-yl)-2-hydroxypropanes that are not so conjugated are used in the detection of phosphate esters of biological species by either MALDI-TOF mass spectrometry or by dye displacement.

Coumarin-Based Cyanine Dyes For Non-Specific Protein Binding

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US Patent:
20060166368, Jul 27, 2006
Filed:
Jan 26, 2005
Appl. No.:
11/044798
Inventors:
Thomas Berkelman - Oakland CA, US
Assignee:
BIO-RAD LABORATORIES, INC. - Hercules CA
International Classification:
G01N 33/50
US Classification:
436086000
Abstract:
Protein dyes whose molecular structure is that of a coumarin moiety coupled to a quaternary ammonium heterocycle through a vinyl or polyvinyl linkage demonstrate the ability to associate with proteins in a non-covalent, non-specific manner at low pH, where the associated form displays a significantly higher fluorescence emission than the unassociated form. This makes the dyes useful as selective labels for proteins at the low pH and eliminates the need for the removal of extraneous components from the medium in which the proteins reside prior to detection.

Use Of Squaraine Dyes To Visualize Protein During Separations

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US Patent:
20080091015, Apr 17, 2008
Filed:
Aug 21, 2007
Appl. No.:
11/842779
Inventors:
Thomas Berkelman - Oakland CA, US
Sergiy Yarmoluk - Kyiv, UA
Vladyslava Kovalska - Kyiv, UA
Mykhaylo Losytskyy - Kyiv, UA
Kateryna Volkova - Kyiv, UA
Assignee:
Bio-Rad Laboratories, Inc. - Hercules CA
International Classification:
C07D 239/54
C07D 209/12
US Classification:
544301000, 548455000
Abstract:
Squaraine dyes are incorporated into a separation medium in which protein or polypeptide mixtures are separated, which medium also contains a detergent that forms a complex with the polypeptides or proteins. The dyes, upon excitation in the separation medium, exhibit a heretofore unrecognized selectivity in their fluorescent emissions by emitting a signal only when the dye molecules are associated with complexes of protein (or polypeptide) and detergent molecules, despite the additional presence of dyes in the bulk of the separation medium. The dyes are thus able to indicate the presence and locations of proteins or polypeptides in the separation medium without the need for removing unassociated dyes from the medium.

Cyclometalated Transition Metal Complexes For Multiplex Analyte Detection

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US Patent:
20100144046, Jun 10, 2010
Filed:
Nov 30, 2009
Appl. No.:
12/627393
Inventors:
Thomas R. Berkelman - Oakland CA, US
Assignee:
Bio-Rad Laboratories, Inc. - Hercules CA
International Classification:
C07F 15/00
G01N 33/68
US Classification:
436 86, 546 4
Abstract:
A complex containing a transition metal ion and a plurality of donor ligands each of which is fully coordinated to the transition metal ion and is either a nitrogen donor ligand or a cyclometalated donor ligand, such that at least one of the donor ligands is a cyclometalated donor ligand bears one or more reactive groups connected to at least one of the donor ligands through a linker that includes a chain of four or more atoms. The linker offers advantages that make the complex particularly effective in labeling biomolecules and in multiplex analyses.

Hydrolysis-Resistant Polyacrylamide Gels

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US Patent:
20120285830, Nov 15, 2012
Filed:
Jul 23, 2012
Appl. No.:
13/555944
Inventors:
Craig Rowell - Albany CA, US
Cory Panattoni - Winters CA, US
Thomas R. Berkelman - Oakland CA, US
Sean Cater - Oakland CA, US
Shane Petersen - Fairfield CA, US
Lee Olech - Pinole CA, US
Xuemei Yang - Walnut Creek CA, US
Assignee:
Bio-Rad Laboratories - Hercules CA
International Classification:
C07K 1/26
US Classification:
204468
Abstract:
Polyacrylamide gels that offer high resolution in protein separations and are more stable relative to hydrolysis than conventional polyacrylamide gels that rely on Tris or Tris-Bis as buffering agents are made by incorporating triethanolamine in place of most or all of the Tris or Tris-Bis.

Hydrolysis-Resistant Polyacrylamide Gels

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US Patent:
20140008226, Jan 9, 2014
Filed:
Jul 3, 2013
Appl. No.:
13/934936
Inventors:
Cory Panattoni - Winters CA, US
Thomas R. Berkelman - Oakland CA, US
Sean Cater - Oakland CA, US
Shane Petersen - Fairfield CA, US
Lee Olech - Pinole CA, US
Xuemei Yang - Alamo CA, US
Assignee:
Bio-Rad Laboratories - Hercules CA
International Classification:
B01D 57/02
US Classification:
204469
Abstract:
Polyacrylamide gels that offer high resolution in protein separations and are more stable relative to hydrolysis than conventional polyacrylamide gels that rely on Tris or Tris-Bis as buffering agents are made by incorporating triethanolamine in place of most or all of the Tris or Tris-Bis.

Wikipedia References

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Thomas R. Berkelman

Thomas R Berkelman from Oakland, CA, age ~63 Get Report